Mature miRNA: hsa-miR-548ad-5p

Mature miRNA

miRNA Name hsa-miR-548ad-5p
miRNA Sequence 5' - aaaaguaauugugguuuuug - 3' (length = 20)
Predicted Targets miRDB
Validated Targets TarBase
miRBase ID MIMAT0032114
Similar miRNAs hsa-miR-548a-5p, hsa-miR-548ab, hsa-miR-548ae-5p, hsa-miR-548ak, hsa-miR-548am-5p, hsa-miR-548ap-5p, hsa-miR-548aq-5p, hsa-miR-548ar-5p, hsa-miR-548as-5p, hsa-miR-548au-5p, hsa-miR-548ay-5p, hsa-miR-548b-5p, hsa-miR-548bb-5p, hsa-miR-548c-5p, hsa-miR-548d-5p, hsa-miR-548h-5p, hsa-miR-548i, hsa-miR-548j-5p, hsa-miR-548o-5p, hsa-miR-548w, hsa-miR-548y, hsa-miR-559 (sharing the same seed sequence with hsa-miR-548ad-5p).

Precursor miRNA

Precursor Name hsa-mir-548ad
Genomic Location chr2:35471405-35471486 (+); nearby genomic features
NCBI GENE ID 100616475
miRBase ID MI0016770
Precursor Sequence 
c                    a     g       -a   
 uguuagguuggugcaaaagu auugu guuuuug  aagu
 |||||||||||||||||||| ||||| |||||||  ||| a
 auaaucuaaccacguuuuca uaaca caaaagc  uuca
c                    g     g       gg

References

  • Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. Hansen TB, Kjems J, Bramsen JB. RNA Biol. 2011 May-Jun;8(3):378-83.

  • Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Liu Q, How T, Grubor V, Gao Y, Patel A, Wu H, Zhu J, Blobe GC, Lipsky PE, Chadburn A, Dave SS; Hematologic Malignancies Research Consortium. Blood. 2010 Dec 2;116(23):e118-27.

  • miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4.