MicroRNA and Target Gene Description:
 
miRNA Name mmu-miR-539-3p miRNA Sequence CAUACAAGGAUAAUUUCUUUUU
Target Score 69 Seed Location 2536
       
NCBI Gene ID 93887 GenBank Accession NM_053141
Gene Symbol Pcdhb16 3' UTR Length 2648
Gene Description protocadherin beta 16

3' UTR Sequence

    1 ctgcttttca tcatgtgtac tggattttat catatactca actacttttc ttgctgtgcc
   61 cattttgaac ttctaaaaca tacttaaaac ttgtttgcag gctattctct ccatggtttt
  121 agaaagtatc tcagcttttc tccaaactgg aagatgaaat gttttaatct tgtttggttt
  181 tgtttgtttg tttgtttgtt taatgtatca ctagttgcac aaatctttgt tctgggatgg
  241 tttggaaatg tacaagaggg taaaaagggg aaatcaattc aaccgaatca gatggaattc
  301 agggtgtgtt ctctcactga atacacccga catagcaatg ctcaaacaca acgaggtcta
  361 atcagatagg agaacgaggg gctcactggg acctctgcct tttgctttat ttggcctcta
  421 ctggactgtc tttgttgatg ttttctctta aaaatcttac ttagccacat ggttcctcat
  481 tagcttgcta ttagttttca tatcactact ttaagctgct ttctactttg ttcgtttgct
  541 tgcttgcttg cttgcttgct tgcttgtttt ttggttggtg ttgaggtttc agaatggtgt
  601 cccttattta cctggtaggt tgaaagagca tagcagtagc attgagtttt cacttctgtt
  661 aaatacttgc cagtcagaga aactgcatca gccagtattg attttttttc ctttctttgt
  721 tgccattcca catttctttc ttgccagtca tgtgcttagt taaaagaata cattttcact
  781 gtcttttttt ttttctctag caaatagatt agggcatatg gttagcttat agtgagatgt
  841 aagatgtggt gccttccaca gctcttcagt tgaagagaaa ctgggggggg gacctatgca
  901 taccaagtaa ggtctgtctc tctgatctac cactttcaat acccaagaac acttgtaaag
  961 ggagatgtct cacctggaaa gggatttcac cctttgttca tgttatgttc ttcctaggat
 1021 gttcgtggta taatgagcgc acaaatactc atgttggctc tgtgataggt gtgacgggct
 1081 aaagtagcat gaaatggact tagctgtgat gatccctggc aactcaggag ttctcatatt
 1141 attccccgcg ttgccaattt cttagccttt ttaaacattc agaaataaag gaagtcccat
 1201 gtcattattc tagcttttat gctatggtca gttcttatgc tatggaatct atttgtgtgt
 1261 ttgtgtgttt gtgtgcctgt tggtgcatga gtgcttgcag atgtccttgc gcctctgcat
 1321 gttgaggtcg gaagttgatg tctaccttcg ttgctcagtt atctagacta gccagggagc
 1381 tctgtggaaa cactgactaa ctggtcatga ttctgggcaa taaaaggaaa agtctgagat
 1441 ccaatcctag ttacctgatt ctaatgaccc agttcttagt aatatgcttt actgataagc
 1501 atatactggt agcattattt tcctatgaag agaaatccat ttgtcccact ccatgaataa
 1561 aatgaccctg tgtaaatgta atctttagct catagtttgt atttctttct atagcagtga
 1621 ccacactgct tagaaaataa cccaaagggc tcacaaaaat caatgaccta agtaaattgg
 1681 atcacactac aactgctctc ttcatgacga agaaatcagc ctgattatat tcttgtgggc
 1741 actcaatgag tcacatgctt tattgtggaa gtgagttgtc ctatatgggc agcagaatca
 1801 ctctatggtt gtgtttattg gaccttatct gtctcttcag tcatcttcta taaactctaa
 1861 aatattatac acttcatatt cagtgggccc attattaaaa ttaaatatct tatgctcact
 1921 tcagcattgt gtatgtgttt gaaagcaatt gctttctaga agtttagctg aaaactaatt
 1981 ttaagaaaac tacaagcaat attatggatg aattttcaca cttaaataac tgagagattc
 2041 ttgaaattct gtaaaaaaaa tgatgtttct aattactttc tggtgcagtt aaccttttat
 2101 ctttggcaaa ataatgcccg ttgatgcctt cttttaaata atactataaa acatcagagg
 2161 accatacatg actttttaag aagaatgatt tggcacaact gaataagaaa ttctttagca
 2221 cttaattatg ctattcatat agaagctatc agtttttggt gttttcaaac aataatccat
 2281 atttatgtcc tgttctgttt ctctgttgct gtcagaaaat tcacaagaag ttgcttaaaa
 2341 caataaaatg tattatccca tagttttgta aataaaaaaa aaaaaccaat aagtgtctaa
 2401 ttgaactaac aagagaagtc catgggaaca cattgtgctc tggagacttt atagaacctt
 2461 ttttgtcttt tccatccaga tgttgcccac attacatggt gcatggtccc ttcaacttca
 2521 cagcatgtaa cgtttcttgt atagccattt tctctgaccc actctgaaaa tattctttga
 2581 ataaaagttc tttatcaaaa taaataaata aataaataaa taaataaatt ctttatccaa
 2641 aaaaaaaa