|
|
| MicroRNA and Target Gene Description: |
|||
| miRNA Name | mmu-miR-1896 | miRNA Sequence | CUCUCUGAUGGUGGGUGAGGAG |
| Target Score | 59 | Seed Location | 1496, 2452, 2957 |
| NCBI Gene ID | 20238 | GenBank Accession | NM_009124 |
| Gene Symbol | Atxn1 | 3' UTR Length | 7315 |
| Gene Description | ataxin 1 | ||
3' UTR Sequence |
|||
1 agaccttgcg ggcagcggag gcccggggcc tccttttact gtctgtatcc agattactgt 61 actgtaggct aagtaacaca gtatttacat gttacatcct ctttaggttt gtattctaac 121 cttgtcatta gagtcaaaca ggtgtgtcgc aggagactgg tgcgtttgca ttgtctgcaa 181 gggtctgttg aggagctggt gggtggagga tggtcagaac catgtccatg gagctcccgg 241 gcatccttag tggccctgaa tgtggcttca tcagcccctg ccttctccgg cagtgtgcag 301 agtcgagggg catcagttcc cactggtttc aagaacaaac acagtgggaa gtatcctgca 361 agggagtgtc tgggtgcgtg tcccttgtga aggagtgcga gtgagggtgt ctctttctct 421 gcctctgtct ccctcacttg ctccctctca gtgtggggtt gggggacctg ggtttcccac 481 ctgcaaagtc atcagggaac ccagcttcca ggcattgtag ggagacatca gacaggcaga 541 tgggaaacta gtttcaaaga acgtggttct ctccaacata ttttacaata aaaagcaact 601 tttaatcata gatatataga tatatatata tatttccccc catggggcct gactgcactg 661 aggttttttt gttttatttt gttttgttgg gtttttgttt ttgttctttt tttttttttt 721 tttttttttt tttttaagag cagctgccac ttgcaggatt tcatttctgc tttacccggt 781 ccagtccagt gacatcatca gtcgtcatgg tgggcaggga aagtccttgc tcaggtcact 841 cctggtcagg caggtagcag tggggcggga gggacggagg gagcacccac actggtttct 901 gtgcagtgtt aggaaaagca atcaggttac ttgcgttggc ttccaagaag gaaaatgcaa 961 gccccgcttc ccgcgagagc cagcttctcc cagctgtgcc ggcagcatct tttctgtatt 1021 ttaggtctag tactgttcat gactatggac aactcgggtg ccgctttttt tttttctttc 1081 tttctttttt cctcaatccc agtgtgacat gaggagttag atctggaaga tgctcctctg 1141 ttactttatc tcgcaaacag ctaaaaatgc tgtgcaggct tcttaaccaa gcatcttggt 1201 ctgtcattca acaagtactg tatctcactt tcgactcttt ttgggaaaag aaaaggaaaa 1261 aaaaaatgac aaacctaagt tgcttttgtt tttgtttttg ttttttcttc tcaacactgt 1321 aactacactt cagctctgct cacaagccag caatcgaaaa ctccaatctg gtttaaaagg 1381 atgaatgtga agtacgaact agcccgtgac aatatatgac taccgagtac tacctgacgg 1441 caggcacttg tcactttgat gttggagaaa gagttaaagg catatgcaga gttggcagag 1501 aaaccgagac aagacacaga ggaaaagaca ctcggttgtg tccagtgttt ttaggacgaa 1561 cttctaaaga actttgcgat ttgcacatct tgagtttata atttgtgtga tattcctgca 1621 gtttttatct aataacattg tgggaaaggt ttgggagggt tacaagagca taaataaatg 1681 tagcaaaatt actttctaac ctgcctagac cctaggccct tcttagaagg ttctgtcccc 1741 tttgagactt cattttgtca tctaccacat ctgtcaccag aagccaggtc tgagggtctt 1801 cttcagcgcc attgagagtt tcccatatag acattttata tatgtgagca agtattttca 1861 tttctggaaa aaaaagtgtt aaattttttt ttaaaagaaa cttatgtttc tatttgaaat 1921 ccaactagga tctaatgttt ggtacaaaac tccagaaatg gtattttcat aaagtcacaa 1981 gttttcattc ccagaggtca aaatatcatt tgtgggttct gagtgggtct taaagtactt 2041 taaccctagt tttataaatg gggagaagtt tttaaacatt ctttcttggc tacaacctaa 2101 gtaagtactt atttgacgtt tctttttagc aatttaaaaa gaaaagattt cttccatttc 2161 tcaaaataga aaaaaaaaaa aaccaaaaag accctcccct ggcaacccac atacatgttg 2221 gctatccagt ctccattcac agtggctttt gttgggacta atgatctttt tccagaccat 2281 tttctgggat gtaccaaaca cctttgagta ggtccggaat agctggcctc tccctaaact 2341 tcatcgccct ctccgcccgc tggcagagct gggtgagccc gttcttgcaa tcagacgctt 2401 atttagtgct gtgatccttt tgttttattt tatttttttt aatctttctg ttcagagacc 2461 ttgcttgatc ttccctatat ctgctcaggg cactggcact tactaggttt tcggttttgt 2521 tttgttttgt tttgttttaa cctccaatgg tgagaggact aggaggttgc cacggaggcg 2581 ctgtgtgcca gttatctaca acagcccctg tgagctcaga aaacacacac acacacacac 2641 acacacacac acaaacacac actctgctct ctggctaact ccgaggagtg aactgactgc 2701 atccactaag ctgacactaa aacaggtaaa aacacacatg gctcagagca ataggaatat 2761 cataacttgt ggttctattt caggtatagg aattatacaa atcattgatt cttccgaagc 2821 atccgtccca tctcattctc tggctccctt agcatgtgca atactttgtg tgccaatagt 2881 gtgctatcta gttaaagttc attccctttt ggccttttcc ttgttcggtg ggctgacctt 2941 tcttcccctc gctggccaga gaaaggctgg aggagtgagc caggagaggc gagccccttc 3001 catttctcct taacaccgat ggatgcagag tgctagggta ggcagcctat gggagcctgt 3061 gtgtgtctgt caccaggaca cagtgagagc cagccaagga gacctgaggg aagcactttg 3121 aaggtccgtc accacactct gcaaaggccc ctcgctctgt agtgaagctg gaatggagcc 3181 aggaggcgga gtggctccta ggacgaactc tggagcggaa tggtcttcag tcaactcatt 3241 ttcagtctct tctgtgtcct tgagactttg atccctgcct ttgacacaag caacttattg 3301 catatgtgtg tgttctgagc atgcccacca gtggctttgg agggcaacct ggcaaccaca 3361 gtcaccattc ccttgggaca gctttctctt caaacaggaa gaacacacag aggcaggagc 3421 cacctcttat ttgcagacat tggtggggtc ctccaggctc ccggagcacc tttggtcaac 3481 tgtgtaggga gcacggtaat agcagtgccc tcatcggaca aggatcagcc acgcgcctct 3541 gtacctgtcc tctttgcaat atttaccaac agccgacttt tccttcttct ctttcctgct 3601 ttccatttta aaacaaagta acagcaggcc ttttttgtgt ttacaacgga acacaatcac 3661 caagaaatta gtcagggcaa aaagaaaaca tagtaatatt actcataaga aatcagcaaa 3721 caagaacctc tttctaggga tttctaaata cacaacaacg tgactgttcc ttagactgtt 3781 taactttaga attatttcag tttgtctggg ccaccttggg ggtcagtggg atggggtagg 3841 gactggggtg ggggaaggcc agggatacca cttacctcaa atctttttaa aagtggaaat 3901 ccaaattgca tttgggggag ggtggggagg ggggacttgc aggataatcg tctatgttgg 3961 tcacattttg cttttctcga ttcatccaac tcagtttggg atggcctgat gtttgtggtg 4021 gtggcaacag aacgtcctta actctgaacc ccaaccttgt atgttttctg ttaggtgagc 4081 ttgttgggtt cctccccacc cccttacccc ataaggaagt ggcagcgtcc tttctccctt 4141 gcaaggaacc ctgcagaacc ttccacacct cttactcagg gatggggctg gtgtgtgtgt 4201 gtggaacaca gatgtgttca gcaacagcac tttggactgc tctggagtag ggttgtacaa 4261 tttcaaggaa tgtttggatc tccccgcaca gtgtggattg ctccttagct actgcacaga 4321 ttgcaatata atgctgcacg ttcaagacga gcagtagctc ctcataatca gaagaaaaaa 4381 aatatatcca ctctttgcac atagtttgat ctttactgaa atatgttgcc aaaatctgtt 4441 tttgttctag ctttgtatct tttcatttct ttctttctct ctctctctct tttttctttt 4501 aaggaaacaa ttgataatac cttgtaacat ctgtgactac taaggaaacc tattttgtag 4561 atgcttttga agacactaac acctatttca gacacgggtg aggaggcaga gctcttggga 4621 tagaaagcca gactttgtaa gttgagttgg catggcaact gtttcctgag ccacaagacc 4681 ctcaaccaac tggtctgctc tctctctcga gagcccttcg ctcctcattt cccagtcacc 4741 ccctttgact ccaggggaat acagggcctc cagtctccgg gtcctatcca gtttctttag 4801 tggttgagat gaacggcaag agaatcatat tttgttgttt taaaagtgga gcaaaggcct 4861 ttgcatccac agttgtgttt tgatgccagg atttccgaaa tagaaaattt aaggaaaaat 4921 cgagtaataa ctatagagaa tttacttttc ttttaataaa gcacatgcgt atgacctgtt 4981 gagttgggtt ggttttctcc ctgtccatga acagtgttgt atttctgttc ctaaggcaac 5041 tcgaaacagt ttgcacacct ctactctgga gctgggattt ctttcataga tgacctcgct 5101 tcaaatgtta ccttactgat aggctttttc ttgtagcgct ataccttgtg ggaagttttt 5161 ttgttttgtt ttgttttttt ctttaaagta cacccaattt gagcagctgg ggggtggggg 5221 agggagggtt gagacactca ctttgggggt gggtgggtta cagataattt ttttttaaaa 5281 aaattgcaca aaagaaaaat gaatgttgaa atgattcatt cagtgtttga aagagacaga 5341 tctgttgaaa ctatgagttt catattttgt gtgtaaaaaa aacaaaaaaa caaaacaaaa 5401 aaaacaaaac agaggagggg tttgaaagtt acatgtttgg gggtttattt ttcctgtata 5461 tagcaatttg ttgtcttgat catcaaattt gtatggttat ggcctggaag aattatgatg 5521 tcagaggctc ttcaactata ccgtacctat gcttactgtt ctgtttttgt tacacacggc 5581 tcttgtgtga aggatggggg aactctgtat tccgctattt gaggatactg tccattccta 5641 ggccgaaagt acttccctaa gttcccttct taagccattg caactttact ttggatgatg 5701 tctgacattt tcagcacttc ctgttcctat caacccaaag aatataatcc tgaacatgaa 5761 gtgtttctaa aagggatcct ccttcccagt agacagaaaa aagtcgagcc tttcttctgc 5821 ctcccacccc agacctcatt cctacagggg tagaacaccc attttggctt gaatgcctgg 5881 cttttgtttt gatgtttctc aagtagaggc cagacgaaat gcagaacggt ttctcagagt 5941 tatattccag ctcagcagtt gcgctgggtg gtgcaaacca gacagcgtgg gggcagtaaa 6001 cagaccctac ctttaattct tcaatttggg ttcatgtccc ctcccttaag gcgcaagttc 6061 ttattgctta gattgacctt gacaaaggca gaagcgagac atcgggtcag cttttcacat 6121 cctgacacgt gcatacagga acttcacctg tattcagatg aagtgtgttt ggccaataga 6181 taccgtctac atgataccag tctctaagaa cttccctaac actttttaac tgaaaggagt 6241 taagtcttcc actacagatc acttggagac tccatccacg catgtcctct tgtccctttg 6301 cttgcctgga tggctcatgt gaaggcctgt gtgggaagca ctgtttacag taacccttac 6361 caagataata tactgtcccc tagactaccg agctgaggtg acactggctt agaactgttg 6421 gagtgaaaga tcagttacta agaaggttgg tgcacaggtt ttctccagtt cttacaggag 6481 ccccttgctc ggaagttatt ctccagtcca agggtgggat gcactgttga gtccatgatg 6541 aggcgtaacc atggcaaccc accacagtcc cattctgtga ctactgcccc ctccccaacc 6601 cacactgctc aagtgtgacc caggtagtgt cagcagaaag ggggttgcgg tggagtcctg 6661 tcagtattta tggtggcctt tcggtaagac agtctacatc tctaaccagt ggagtcttgg 6721 ccctccggaa cctgagatct gcaccagttg aagggtttta acatcaggtt cccagaccct 6781 ccaatttcca ttcattgcct ccccacaggc caagcggaaa cagacaccaa aacttgggct 6841 aagggtacta ccatgtggag aactagggaa aacaaaatgg tttttttttt tgcaccttat 6901 tgaaaagaaa cttttaagtg catacatagt taagagcttt tatcgtgaca ggagaacgtt 6961 tccatatgcg tgcatactct ctgtaattcc agtgtaaaat gttgtatttg cactagcttt 7021 tttaaaacaa atattaaaaa aatggaagaa ttcatattct attttctaat cgtggtgtgt 7081 ctatttgtag gatacactcg agtctgttta ttgaatttta tggtcccttt ctttgatggt 7141 gcttgcaggt tttctaggta gaaattattt cattattata ataaaacaat gtttgattca 7201 aaatttgaac aaaattgttt taaataaatt gtctgtatac cagtacaagt ttattgtata 7261 atactcgtac tactaataaa ataacagtgc caattgcaaa aaaaaaaaaa aaaaa |
|||