Precursor miRNA: hsa-mir-3144

Precursor miRNA

Precursor Name hsa-mir-3144
Genomic Location chr6:120015179-120015257 (+); nearby genomic features
NCBI GENE ID 100422951
miRBase ID MI0014169
Precursor Sequence 
                    a  g  a       auau
aacuacacuuuaaggggacc aa ag uauauag    c
|||||||||||||||||||| || || |||||||     a
uugaugugaaauuucucugg uu uc auauauc    g
                    c  g  c       cauc

Mature miRNA

Mature Name hsa-miR-3144-5p
Mature Sequence 5' - aggggaccaaagagauauauag - 3' (length = 22)
Predicted Targets miRDB
Validated Targets TarBase
miRBase ID MIMAT0015014

References

  • The association between rs1972820 and the risk of breast cancer in Isfahan population. Zabihi N, Sadeghi S, Tabatabaeian H, Ghaedi K, Azadeh M, Fazilati M. J Cancer Res Ther. 2017 Jan-Mar;13(1):26-32.

  • Two less common human microRNAs miR-875 and miR-3144 target a conserved site of E6 oncogene in most high-risk human papillomavirus subtypes. Lin L, Cai Q, Zhang X, Zhang H, Zhong Y, Xu C, Li Y. Protein Cell. 2015 Aug;6(8):575-588.

  • miRBase: integrating microRNA annotation and deep-sequencing data. Kozomara A, Griffiths-Jones S. Nucleic Acids Res. 2011 Jan;39(Database issue):D152-7.

  • Characterization of the Melanoma miRNAome by Deep Sequencing. Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK. PLoS One. 2010 Mar 12;5(3):e9685.

  • Discovery of novel microRNAs in female reproductive tract using next generation sequencing. Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH. PLoS One. 2010 Mar 10;5(3):e9637.

  • miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4.