Mature miRNA: hsa-miR-3179

Mature miRNA

miRNA Name hsa-miR-3179
miRNA Sequence 5' - agaaggggugaaauuuaaacgu - 3' (length = 22)
Predicted Targets miRDB
Validated Targets TarBase
miRBase ID MIMAT0015056

Precursor miRNA

Precursor Name hsa-mir-3179-1
Genomic Location chr16:14901508-14901591 (+); nearby genomic features
Clustered miRNAs hsa-mir-3179-1,hsa-mir-3670-1,hsa-mir-3180-1 (within 10kb in genome)
NCBI GENE ID 100422960
miRBase ID MI0014213
Precursor Sequence 
                      a               gcc
caggaucacagacguuuaaauu cacuccuucugcugu   u
|||||||||||||||||||||| |||||||||||||||   
guccuagugucugcaaauuuaa guggggaagaugacg   u
                      a               aca
Precursor Name hsa-mir-3179-2
Genomic Location chr16:16300159-16300242 (+); nearby genomic features
Clustered miRNAs hsa-mir-3179-2,hsa-mir-3670-2,hsa-mir-3180-2 (within 10kb in genome)
NCBI GENE ID 100422886
miRBase ID MI0014216
Precursor Sequence 
                      a               gcc
caggaucacagacguuuaaauu cacuccuucugcugu   u
|||||||||||||||||||||| |||||||||||||||   
guccuagugucugcaaauuuaa guggggaagaugacg   u
                      a               aca
Precursor Name hsa-mir-3179-3
Genomic Location chr16:18411894-18411977 (-); nearby genomic features
Clustered miRNAs hsa-mir-3180-3,hsa-mir-3670-3,hsa-mir-3179-3 (within 10kb in genome)
NCBI GENE ID 100423006
miRBase ID MI0014221
Precursor Sequence 
                      a               gcc
caggaucacagacguuuaaauu cacuccuucugcugu   u
|||||||||||||||||||||| |||||||||||||||   
guccuagugucugcaaauuuaa guggggaagaugacg   u
                      a               aca
Precursor Name hsa-mir-3179-4
Genomic Location chr16:18494493-18494576 (-); nearby genomic features
Clustered miRNAs hsa-mir-3670-4,hsa-mir-3179-4 (within 10kb in genome)
NCBI GENE ID 103504729
miRBase ID MI0031510
Precursor Sequence 
                      a               gcc
caggaucacagacguuuaaauu cacuccuucugcugu   u
|||||||||||||||||||||| |||||||||||||||   
guccuagugucugcaaauuuaa guggggaagaugacg   u
                      a               aca

References

  • Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C. Cancer Res. 2011 Jan 1;71(1):78-86.

  • Characterization of the Melanoma miRNAome by Deep Sequencing. Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK. PLoS One. 2010 Mar 12;5(3):e9685.

  • Discovery of novel microRNAs in female reproductive tract using next generation sequencing. Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH. PLoS One. 2010 Mar 10;5(3):e9637.

  • miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4.