Mature miRNA: hsa-miR-6885-5p

Mature miRNA

miRNA Name hsa-miR-6885-5p
miRNA Sequence 5' - aggggggcacugcgcaagcaaagcc - 3' (length = 25)
Predicted Targets miRDB
Validated Targets TarBase
miRBase ID MIMAT0027670
Similar miRNAs hsa-miR-328-5p (sharing the same seed sequence with hsa-miR-6885-5p).

Precursor miRNA

Precursor Name hsa-mir-6885
Genomic Location chr19:6389638-6389703 (-); nearby genomic features
Clustered miRNAs hsa-mir-6885,hsa-mir-6790 (within 10kb in genome)
NCBI GENE ID 102465533
miRBase ID MI0022732
Precursor Sequence 
ccugg         cu c c          ---a  g
     aggggggca  g g aagcaaagcc    gg a
     |||||||||  | | ||||||||||    || 
     uccccucgu  c c uucguuucgg    uc c
---ga         -- - -          agag  c

References

  • Discovery of hundreds of mirtrons in mouse and human small RNA data. Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC. Genome Res. 2012 Sep;22(9):1634-45.

  • miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4.