Mature miRNA: hsa-miR-548u

Mature miRNA

miRNA Name hsa-miR-548u
miRNA Sequence 5' - caaagacugcaauuacuuuugcg - 3' (length = 23)
Predicted Targets miRDB
Validated Targets TarBase
miRBase ID MIMAT0015013
Similar miRNAs hsa-miR-7161-5p (sharing the same seed sequence with hsa-miR-548u).

Precursor miRNA

Precursor Name hsa-mir-548u
Genomic Location chr6:57390132-57390212 (+); nearby genomic features
NCBI GENE ID 100422884
miRBase ID MI0014168
Precursor Sequence 
      a               - ug      u  u   c
auuagg uggugcaaaaguaau g  guuuuu uc uua u
|||||| ||||||||||||||| |  |||||| || ||| 
uaaucc accgcguuuucauua c  cagaaa gg aau u
      a               a gu      c  u   u

References

  • Characterization of the Melanoma miRNAome by Deep Sequencing. Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK. PLoS One. 2010 Mar 12;5(3):e9685.

  • miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4.