Mature miRNA: hsa-miR-5001-5p

Mature miRNA

miRNA Name hsa-miR-5001-5p
miRNA Sequence 5' - agggcuggacucagcggcggagcu - 3' (length = 24)
Predicted Targets miRDB
Validated Targets TarBase
miRBase ID MIMAT0021021
Similar miRNAs hsa-miR-4492, hsa-miR-4498, hsa-miR-762 (sharing the same seed sequence with hsa-miR-5001-5p).

Precursor miRNA

Precursor Name hsa-mir-5001
Genomic Location chr2:232550474-232550573 (-); nearby genomic features
NCBI GENE ID 100847037
miRBase ID MI0017867
Precursor Sequence 
--agcuca      cug    g     -     uc  c         --   u
        gggcgg   cgca agggc uggac  ag ggcggagcu  ggc g
        ||||||   |||| ||||| |||||  || |||||||||  |||  c
        cccgcc   gugu uccug accug  uc ccgucuuga  ccg u
uccucucg      -ca    -     g     --  u         cu   g

References

  • The miRNAs 203a/210-3p/5001-5p regulate the androgen/androgen receptor/YAP-induced migration in prostate cancer cells. Huo C, Kuo YY, Lin CY, Shiah SG, Li CY, Huang SP, Chen JK, Wang WC, Kung HJ, Chuu CP. Cancer Med. 2024 Aug;13(16):e70106.

  • miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. Friedländer MR, Mackowiak SD, Li N, Chen W, Rajewsky N. Nucleic Acids Res. 2012 Jan;40(1):37-52.

  • Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. Hansen TB, Kjems J, Bramsen JB. RNA Biol. 2011 May-Jun;8(3):378-83.

  • miRBase: integrating microRNA annotation and deep-sequencing data. Kozomara A, Griffiths-Jones S. Nucleic Acids Res. 2011 Jan;39(Database issue):D152-7.

  • miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4.