Mature miRNA: hsa-miR-1909-5p

Mature miRNA

miRNA Name hsa-miR-1909-5p
Previous Name hsa-miR-1909*
miRNA Sequence 5' - ugagugccggugccugcccug - 3' (length = 21)
Predicted Targets miRDB
Validated Targets TarBase
miRBase ID MIMAT0007882

Precursor miRNA

Precursor Name hsa-mir-1909
Genomic Location chr19:1816159-1816238 (-); nearby genomic features
NCBI GENE ID 100302210
MIM ID 615201
miRBase ID MI0008330
Precursor Sequence 
cauc    acaa       ug  -   g     c u   g
    cagg    uggugag  cc ggu ccugc c ggg c
    ||||    |||||||  || ||| ||||| | |||  c
    gucu    gccacuc  gg ccg ggacg g ccc g
cccc    --ac       gu  g   g     c u   u

References

  • MicroRNA expression profiles in pediatric dysembryoplastic neuroepithelial tumors. Braoudaki M, Lambrou GI, Papadodima SA, Stefanaki K, Prodromou N, Kanavakis E. Med Oncol. 2016 Jan;33(1):5.

  • Short GC-rich RNA similar to miR 1909 and 1915 folds in silico with the 5'-UTR and ORF of Notch and responders: potential for the elimination of cancer stem cells. Li Y, Mine T, Ioannides CG. Oncol Rep. 2010 Dec;24(6):1443-53.

  • miRBase: integrating microRNA annotation and deep-sequencing data. Kozomara A, Griffiths-Jones S. Nucleic Acids Res. 2011 Jan;39(Database issue):D152-7.

  • MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries. Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP, Gentleman R, Ruohola-Baker H, Tewari M. Stem Cells. 2008 Oct;26(10):2496-505.

  • miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4.